Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910356.1_cds_XP_016460393.1_53819
CDS Infomation

[gene=LOC107783880] [db_xref=GeneID:107783880] [protein=F-box protein At3g12350-like] [protein_id=XP_016460393.1] [location=complement(join(19906..20400,22482..23396))] [gbkey=CDS]
Sequence

ATGGCAAAAGCAGATGAAATTCAAACCATTTCCTTATCATTCACTGATTTCCCAGAAGAT
GTGCAGCTCTGTATCCTCTCATTCCTCACCCCTTTAGATATCTCCAATTTCGCCTGCACT
TCAAAGCGCTTCGTCTCTCTTTGCCGTGATGACCCAAGACTCTGGTTTTCCATGTGTCAC
CGCAAATGGGGATCCAAAACCCATATCAACAAATGGGTTAATAACGGTAGAATTCCTTAC
AAGCTTCTTTACAATACCCTTTTAGAGTATGAGAATCTCATTGGCTTCTGGCGCCTCAGT
GGTACTGATTCTGATACTGATTCCTCTTTAATCTTTTTTGAGTGGGGTTCATTTTATATA
GCTGGTTCAAGGGTTAAACCCGCAAGAAATTGTACTTATGGAGTGATAAAGTTGCCATTT
TTATGGATGGGTTTTAACTCTAAGGGTGAAATTGTCAATTATCTCGATCCTGAAGGGAGA
GTTGAGTTGTTATCTGAAAATGTGATGAATTTTGATGATTTGGGTTTTGGGGAGAGTGAA
TTGATTCAGGTGAATGTGAATTTCATGGGAAAAACTCATGTTGTTGTGGAAGAAAATTGT
GGCAGTGCACTTGGGTATTCTTGTAATTCTCCACAGAACAGAGGAGGATTCAGGAAAGTT
TCAAGCTCAGGGAACATGAGGGGAGAGGAGTATGAGGATTTATGTGGGTCCCCTGGAAGC
TTGCCAGATAGGTTGATGTCCGAGATTTATCAGTATTTCGCCAACAAGACGAGTCCCGGT
GGGAACGGGTCATCGAGGAGGCAGAGAAGGAAGGAGAAGGAAAGGCAGGGGAAAAGGAAG
TGGGAGCCTGAACATTATGTGAAAATCGTGAATTGCTCGCCTACACCAGCCAGGCCTTTA
CAGGGCTTGTGGAAGGGATTCTGTGACGACATGACTTTGGAGTTCTTCCTTGTCTCTTAT
GATGATGTTGGTGGTATCACTTGCAGAAGGGTTGTGGAATTATGTAAACCTTTCTCTGCC
TATGCCCCAGTATTTTGGACTTCAAATACCACATTCATTGAGTCCCCTTTATCTTCAGAA
GAAGAAAACATATATGAGAGTCGCATACATATTCGGCCCCTTGCTGAAGCTGATGACCCA
TGTGAGATTCTGTCTAGTTCTGACAAAGGANTGCCTAGTTCTGATAAGGGAGTTGTTTTG
CGCATGCTTTGCATGAACTCAAGCTACGACTTGGTTATTCCTGATTTGGCAGGAAGCACT
GTAAATCCTAGGCAGGCGGAGGGAAGGATTTGGCAGTATGAAAATGGGACATTTGGATAC
GGGTTTCTGCGAGACAATTACATTATAGACTTGAGGCATATTGCTCAAAATGGTCAGATA
TTTGACACAGCAGATATTTCTAGTGATTGA

Peptide Sequence

PEP ID

XP_016460393.1
PEP Infomation

PREDICTED: F-box protein At3g12350-like [Nicotiana tabacum]
Sequence

MAKADEIQTISLSFTDFPEDVQLCILSFLTPLDISNFACTSKRFVSLCRDDPRLWFSMCH
RKWGSKTHINKWVNNGRIPYKLLYNTLLEYENLIGFWRLSGTDSDTDSSLIFFEWGSFYI
AGSRVKPARNCTYGVIKLPFLWMGFNSKGEIVNYLDPEGRVELLSENVMNFDDLGFGESE
LIQVNVNFMGKTHVVVEENCGSALGYSCNSPQNRGGFRKVSSSGNMRGEEYEDLCGSPGS
LPDRLMSEIYQYFANKTSPGGNGSSRRQRRKEKERQGKRKWEPEHYVKIVNCSPTPARPL
QGLWKGFCDDMTLEFFLVSYDDVGGITCRRVVELCKPFSAYAPVFWTSNTTFIESPLSSE
EENIYESRIHIRPLAEADDPCEILSSSDKGXPSSDKGVVLRMLCMNSSYDLVIPDLAGST
VNPRQAEGRIWQYENGTFGYGFLRDNYIIDLRHIAQNGQIFDTADISSD

Transcript Sequence

Gene sequence data has not been registered.